If you have a soft spot for rich chocolate treats with a luscious surprise inside, the Vanilla Cream Filled Chocolate Ganache Cupcakes Recipe will instantly become your new favorite indulgence. These cupcakes combine the deep, comforting taste of cocoa-infused cake with a dreamy, smooth vanilla cream filling and a decadent dark chocolate ganache topping that melts in your mouth. It’s one of those recipes that hits every note perfectly: moist, creamy, and indulgently chocolatey, yet balanced with a light, fluffy vanilla center that makes each bite truly unforgettable. I’m thrilled to share this wonderful recipe that’s surprisingly easy to master, yet feels like a special occasion with every forkful.

Ingredients You’ll Need

The image shows a group of chocolate cupcakes arranged closely together on a white marbled surface. Each cupcake has two clear layers: a darker chocolate cake base and a thick, smooth, shiny layer of rich chocolate frosting swirled on top. The frosting has visible swirled textures and a glossy finish that catches the light. All cupcakes are in white paper liners, adding a contrast with the dark brown colors of the cake and frosting. photo taken with an iphone --ar 4:5 --v 7

Every ingredient in this recipe is thoughtfully chosen to bring out the best in your cupcakes. From the cocoa powder that delivers that rich chocolate punch to the stabilised vanilla cream that keeps the filling perfectly fluffy and fresh, these essentials come together beautifully for stunning results.

  • 3/4 cup plain flour / all-purpose flour: Provides structure for a tender crumb that’s never tough.
  • 1/2 cup cocoa powder, sifted: Adds deep chocolate flavor; be sure to use unsweetened and regular cocoa for best results.
  • 1/2 tsp baking powder: Helps the cupcakes rise nicely with a light texture.
  • 1/2 tsp baking soda (bi-carbonate soda): Works alongside vinegar for that perfect fluffy crumb.
  • 1/2 tsp kosher salt: Enhances all the chocolate and vanilla flavors subtly without being salty.
  • 3/4 cup brown sugar (tightly packed): Adds natural sweetness and keeps the cupcakes moist.
  • 2 large eggs at room temperature: Bind everything together and add richness.
  • 1/3 cup oil (canola, vegetable, or plain flavored): Keeps cupcakes super moist and tender.
  • 1/3 cup milk (full fat preferred): Adds creaminess and moisture; non-dairy options work too.
  • 1 tsp vanilla extract: Infuses the batter with warm, sweet vanilla notes.
  • 1/2 tsp white vinegar: Activates the baking soda for a light rise without any vinegary taste.
  • 1 tsp coffee granules (optional): Intensifies chocolate flavor without tasting like coffee.
  • 1/3 cup hot water: Dissolves the coffee and keeps the batter smooth.
  • 180g dark chocolate (for ganache): Use good quality semi-sweet or dark chocolate for rich, glossy topping.
  • 3/4 cup thickened or heavy cream: The base of your luscious ganache frosting.
  • 2/3 cup thickened or heavy cream (for whipped cream): Forms the creamy vanilla filling when combined with cream cheese.
  • 50g softened block cream cheese: Stabilizes your whipped cream, adding a slight tang and creaminess.
  • 2 tbsp caster sugar: Sweetens the vanilla whipped cream gently.
  • 1 tsp vanilla extract (for cream): Keeps the filling aromatic and naturally sweet.

How to Make Vanilla Cream Filled Chocolate Ganache Cupcakes Recipe

Step 1: Prepare the Chocolate Ganache

Start by melting your dark chocolate in a microwave-safe bowl. Heat your cream until it’s hot but not boiling, then pour it over the chocolate. Let it sit for about 7 minutes without covering — condensation is the enemy here. Then patiently stir until the ganache is silky smooth. If any lumps remain, zap it again briefly and stir. Pop this in the fridge for a couple of hours, or overnight if you want, until it thickens up to a spreadable consistency like peanut butter.

Step 2: Make the Cupcake Batter

Preheat your oven to 180°C (350°F). Line a muffin tin with cupcake liners. In one bowl, whisk together all your dry ingredients — flour, cocoa powder, baking powder, baking soda, and salt. In a separate bowl, combine the wet ingredients: brown sugar, eggs, oil, milk, vanilla extract, and vinegar until smooth. Dissolve coffee granules in hot water, then add this to your wet ingredients. Pour your wet mix into the dry and whisk until everything is well combined and smooth. Bang the bowl gently three times on the counter to level the batter and remove large air bubbles for perfect cupcakes.

Step 3: Bake the Cupcakes

Fill each cupcake liner halfway to prevent any overflow during baking. Bake for about 22 minutes or until a toothpick inserted into the center comes out clean. Allow the cupcakes to cool in the pan for 5 minutes before transferring them to a wire rack for at least an hour and a half to cool completely. Patience here is key; you want the cupcakes fully cooled before filling.

Step 4: Create the Vanilla Cream Filling

Using a small knife, carefully cut a cylindrical cavity from the center of each cupcake, leaving about a half-inch border. Scoop out the cake and trim the removed piece to form a “lid” about 1 cm thick — keep these lids since they’ll go back on top after filling. To make the filling, beat softened cream cheese, vanilla extract, and caster sugar until creamy, then add the thickened cream and whip until stiff peaks form. This silky vanilla cream will be the heavenly surprise inside your chocolate cupcakes!

Step 5: Assemble Your Cupcakes

Fill each cupcake cavity with a generous spoonful of the vanilla whipped cream, then press the trimmed lid back on top to seal in that creamy goodness. Finally, dollop the chilled ganache on top of each cupcake and spread it gently for a glossy, rich finish. For an extra touch of elegance, sprinkle some white chocolate shavings or decorations atop your ganache.

How to Serve Vanilla Cream Filled Chocolate Ganache Cupcakes Recipe

The image shows two close-up views of a chocolate mixture. In the first part, a clear glass measuring cup holds a thick, smooth chocolate liquid with lighter swirls on the surface, showing its rich texture. The second part shows a thin stream of the same chocolate liquid pouring into a white paper cupcake liner placed in a dark metal muffin tray. The white marbled surface is visible partly under the tray. The scene captures the flow and thickness of the chocolate mixture. Photo taken with an iphone --ar 4:5 --v 7

Garnishes

These cupcakes are stunning on their own, but adding a few white chocolate curls, a dusting of cocoa powder, or even a sprinkle of crushed nuts can elevate their look and texture beautifully. Fresh berries or a tiny mint leaf add a refreshing pop of color that’s perfect for gatherings.

Side Dishes

Pairing these chocolate and vanilla divine cupcakes with a cold glass of milk or a warm cup of coffee brings out their complex flavors wonderfully. For a grown-up twist, you might serve them alongside a scoop of vanilla bean ice cream or a small ramekin of berry compote.

Creative Ways to Present

Imagine serving these beauties on a tiered cake stand for a party, or wrapping each in a pretty cupcake wrapper tied with a ribbon for gifts. You can also place them individually in decorative paper boxes—perfect for celebrations or thoughtful homemade treats.

Make Ahead and Storage

Storing Leftovers

Store your filled cupcakes in an airtight container in the refrigerator. Thanks to the cream cheese stabilizer in the filling, they hold up beautifully for up to 3 days without the cream melting or oozing out. Just remember to take them out about 30 minutes before serving, so the ganache isn’t too cold and the flavors shine.

Freezing

While the assembled cupcakes with filling don’t freeze well because of the cream, you can freeze the unfilled cupcakes for up to 3 months. Thaw them in the fridge and then fill and frost them fresh before serving to enjoy that perfect texture and flavor.

Reheating

Since these are rich and creamy treats, reheating is not recommended. Instead, let refrigerated cupcakes come to room temperature before enjoying. This helps soften the ganache and cake, giving you the best taste experience.

FAQs

Can I use milk chocolate instead of dark chocolate for the ganache?

Yes, but keep in mind the texture and sweetness will change. Milk chocolate is sweeter and softer, so you might need to adjust the cream amount in the ganache. Dark chocolate offers a richer, more balanced flavor that pairs perfectly with the vanilla cream filling.

What if I don’t have coffee granules? Can I skip them?

Absolutely! The coffee is optional and primarily enhances the chocolate flavor without adding a coffee taste. If you skip it, just add the same amount of hot water so your batter maintains the right consistency.

How do I stabilize whipped cream for the filling?

The cream cheese in this recipe acts as a stabilizer, preventing the whipped cream from weeping or melting quickly. If you want even more stability, you can use a commercial cream stabilizer, gelatin, or mascarpone cheese, but cream cheese alone works beautifully here.

Can I make these cupcakes dairy-free?

Some substitutions are possible, like using non-dairy milk or cream alternatives, but the texture and flavor might be slightly different. For best results, stick to full-fat dairy cream and milk, especially in the ganache and filling, as they play crucial roles.

How long does the ganache take to thicken?

Ganache usually thickens to a spreadable consistency after about 2 hours in the fridge. If you want it firmer, you can refrigerate it longer, even overnight, then let it soften at room temperature for about 15-20 minutes before spreading.

Final Thoughts

The Vanilla Cream Filled Chocolate Ganache Cupcakes Recipe is a true treasure for anyone who loves to bake. It’s approachable enough for a weekday treat, yet elegant enough to impress at dinner parties or celebrations. Each cupcake offers a perfect harmony of rich chocolate, smooth vanilla cream, and that glossy ganache finish that makes you smile with every bite. Give this recipe a try—you’ll find yourself coming back to it again and again, sharing it with friends and family just like I do.

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Vanilla Cream Filled Chocolate Ganache Cupcakes Recipe

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4.1 from 15 reviews

Delightful Vanilla Cream Filled Chocolate Ganache Cupcakes featuring moist cocoa cupcakes infused with a coffee flavor enhancer, filled with a stabilized vanilla whipped cream, and topped with rich dark chocolate ganache. Perfect for an indulgent treat with a balance of intense chocolate and smooth vanilla cream.

  • Author: Martha
  • Prep Time: 25 minutes
  • Cook Time: 22 minutes
  • Total Time: 3 hours 15 minutes
  • Yield: 12 cupcakes
  • Category: Dessert
  • Method: Baking
  • Cuisine: American
  • Diet: Vegetarian

Ingredients

Dry Ingredients:

  • 3/4 cup plain flour / all-purpose flour
  • 1/2 cup cocoa powder, sifted (unsweetened regular, not dutch processed)
  • 1/2 tsp baking powder
  • 1/2 tsp baking soda (bi-carbonate soda)
  • 1/2 tsp cooking salt / kosher salt (halve for table salt, +25% for flakes)

Wet Ingredients:

  • 3/4 cup (tightly packed) brown sugar
  • 2 large eggs at room temperature
  • 1/3 cup oil (canola, vegetable or any other plain flavoured oil)
  • 1/3 cup milk (preferably full fat though any % will work, even non dairy)
  • 1 tsp vanilla extract
  • 1/2 tsp white vinegar

Hot Coffee Flavour Enhancer (Optional):

  • 1 tsp coffee granules
  • 1/3 cup hot water

Chocolate Ganache Frosting:

  • 180g / 6 oz dark chocolate / semi-sweet chocolate melts or chips, or chopped dark chocolate
  • 3/4 cup (180 ml) thickened cream / heavy cream (30%-36% fat)

Stabilised Vanilla Whipped Cream Filling:

  • 2/3 cup thickened cream / heavy cream
  • 50g / 3 tbsp block cream cheese, softened (or tub cream cheese)
  • 2 tbsp caster sugar / superfine sugar
  • 1 tsp vanilla extract

Instructions

  1. Make Ganache: Heat cream until just before boiling and pour it over the chopped or chipped dark chocolate in a microwave-safe bowl. Leave uncovered for 7 minutes to soften the chocolate, then stir gently until smooth. If needed, microwave for additional 20-second bursts to melt lumps. Refrigerate the ganache for 2 hours to thicken to a spreadable consistency.
  2. Prepare Cupcake Batter: Preheat your oven to 180°C (350°F) or 160°C (fan-forced). Place cupcake liners in a 12-hole muffin tin. In one bowl, whisk together all dry ingredients (flour, cocoa, baking powder, baking soda, salt). In another bowl, whisk wet ingredients (brown sugar, eggs, oil, milk, vanilla extract, vinegar) until combined. Dissolve coffee granules in hot water.
  3. Combine Batter: Pour the wet ingredients into the dry ingredients and whisk until just combined. Add the hot coffee mixture and whisk again until combined. Firmly bang the bowl on the counter three times to remove large air bubbles.
  4. Fill and Bake Cupcakes: Transfer batter to a pouring jug and fill cupcake liners halfway, ensuring not to overfill. Bake for 22 minutes or until a toothpick inserted in the center comes out clean. Cool cupcakes in the pan for 5 minutes, then transfer to a wire rack and cool completely for at least 1.5 hours.
  5. Prepare Vanilla Whipped Cream Filling: Using an electric mixer, beat cream cheese, vanilla extract, and sugar on high speed until smooth and creamy. Add the heavy cream and whip until firm peaks form.
  6. Fill Cupcakes: Using a small knife, cut a shallow cylinder-shaped cavity in each cupcake leaving a 1.25 cm (0.5 inch) border. Scoop out the cake inside and trim the cut piece to create a 1 cm thick lid. Fill the cavity with the stabilized vanilla whipped cream, then replace the lid carefully to sit flush with the cupcake surface.
  7. Frost with Ganache: Spoon a heaped tablespoon of chilled ganache on top of each cupcake and spread evenly. Optionally decorate with white chocolate shavings or other desired toppings.
  8. Serve and Store: Store filled cupcakes in the fridge. Remove from fridge 30 minutes before serving to take the chill off but not so long that cream melts. These cupcakes keep well for up to 3 days refrigerated.

Notes

  • Vinegar activates baking soda to give cupcakes a fluffy rise; any clear vinegar or lemon juice can be substituted without flavor impact.
  • Coffee enhances the chocolate flavor without imparting a coffee taste; if omitted, still add hot water.
  • Use dark chocolate melts, chips, or chopped blocks for ganache. Avoid confectionary eating chocolate. Different chocolates require adjusted cream ratios.
  • Cream must be 30%-36% fat for proper ganache consistency; low-fat cream results in runny ganache.
  • Cream cheese stabilizes whipped cream to prevent melting and adds a slight tang, keeping cupcakes fresh for 3 days.
  • Ganache requires a 1:1 weight to volume ratio of chocolate to cream (e.g., 180g chocolate to 180ml cream).
  • Filled cupcakes should not be frozen due to the cream filling; unfilled cupcakes can be frozen up to 3 months.
  • Remove cupcake chill before serving for best texture and flavor experience.

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